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Bioelectronic measurement and feedback control of molecules in living cells

Published in:
Sci. Rep., Vol. 7, No. 1, 2 October 2017, 12511.

Summary

We describe an electrochemical measurement technique that enables bioelectronic measurements of reporter proteins in living cells as an alternative to traditional optical fluorescence. Using electronically programmable microfluidics, the measurement is in turn used to control the concentration of an inducer input that regulates production of the protein from a genetic promoter. The resulting bioelectronic and microfluidic negative-feedback loop then serves to regulate the concentration of the protein in the cell. We show measurements wherein a user-programmable set-point precisely alters the protein concentration in the cell with feedback-loop parameters affecting the dynamics of the closed-loop response in a predictable fashion. Our work does not require expensive optical fluorescence measurement techniques that are prone to toxicity in chronic settings, sophisticated time-lapse microscopy, or bulky/expensive chemo-stat instrumentation for dynamic measurement and control of biomolecules in cells. Therefore, it may be useful in creating a: cheap, portable, chronic, dynamic, and precise all-electronic alternative for measurement and control of molecules in living cells.
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Summary

We describe an electrochemical measurement technique that enables bioelectronic measurements of reporter proteins in living cells as an alternative to traditional optical fluorescence. Using electronically programmable microfluidics, the measurement is in turn used to control the concentration of an inducer input that regulates production of the protein from a genetic...

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Flexible glucose sensors and fuel cells for bioelectronic implants

Published in:
IEEE 60th Int. Midwest Symp. on Circuits and Systems, MWSCAS, 6-9 August 2017.

Summary

Microfabrication techniques were developed to create flexible 24 um thick glucose sensors on polyimide substrates. Measurements of the sensor performance, recorded as voltage potential, were carried out for a range of glucose concentrations (0 – 8 mM) in physiological saline (0.1 M NaCl, pH 7.4). The sensors show rapid response times (seconds to stable potential) and good sensitivity in the 0 – 4 mM range. Additionally, we demonstrate that the sensors can operate as fuel cells, generating peak power levels up to 0.94 uW/cm2. Such flexible devices, which can be rolled up to increase surface area within a fixed volume, may enable ultra-low-power bio-electronic implants for glucose sensing or glucose energy harvesting in the future.
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Summary

Microfabrication techniques were developed to create flexible 24 um thick glucose sensors on polyimide substrates. Measurements of the sensor performance, recorded as voltage potential, were carried out for a range of glucose concentrations (0 – 8 mM) in physiological saline (0.1 M NaCl, pH 7.4). The sensors show rapid response...

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A fully integrated broadband sub-mmWave chip-to-chip interconnect

Published in:
IEEE Trans. Microw. Theory Tech., Vol. 65, No. 7, July 2017, pp. 2373-86.

Summary

A new type of broadband link enabling extremely high-speed chip-to-chip communication is presented. The link is composed of fully integrated sub-mmWave on-chip traveling wave power couplers and a low-cost planar dielectric waveguide. This structure is based on a differentially driven half-mode substrate integrated waveguide supporting the first higher order hybrid microstrip mode. The cross-sectional width of the coupler structure is tapered in the direction of wave propagation to increase the coupling efficiency and maintain a large coupling bandwidth while minimizing its on-die size. A rectangular dielectric waveguide, constructed from Rogers Corporation R3006 material, is codesigned with the on-chip coupler structure to minimize coupling loss. The coupling structure achieves an average insertion loss of 4.8 dB from 220 to 270 GHz, with end-to-end link measurements presented. This system provides a packaging-friendly, cost effective, and high performance planar integration solution for ultrabroadband chip-to-chip communication utilizing millimeter waves.
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Summary

A new type of broadband link enabling extremely high-speed chip-to-chip communication is presented. The link is composed of fully integrated sub-mmWave on-chip traveling wave power couplers and a low-cost planar dielectric waveguide. This structure is based on a differentially driven half-mode substrate integrated waveguide supporting the first higher order hybrid...

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Directly deposited optical-blocking filters for single-photon x-ray imaging spectroscopy

Published in:
J. Astron. Telesc. Instrum. Syst., Vol. 3, No. 3 (2017), 036001.

Summary

Directly deposited optical-blocking filters (DD OBFs) have the potential to improve filter performance and lower risk and cost for future x-ray imaging spectroscopy missions. However, they have not been fully characterized on high-performance charge coupled devices (CCDs). This paper reports the results of DD OBFs processed on high-performance photon-counting CCDs. It is found that CCD performance is not degraded by deposition of such filters. X-ray and optical transmission through the OBF is characterized and found to match theoretical expectation. Light-leaks through pinholes and the side and back surfaces are found to lower the optical extinction ratio; various coating processes are developed to resolve these issues.
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Summary

Directly deposited optical-blocking filters (DD OBFs) have the potential to improve filter performance and lower risk and cost for future x-ray imaging spectroscopy missions. However, they have not been fully characterized on high-performance charge coupled devices (CCDs). This paper reports the results of DD OBFs processed on high-performance photon-counting CCDs...

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Efficient cryogenic near-infrared Tm:YLF laser

Published in:
Opt. Express, Vol. 25, No. 12, 12 June 2017, 13408.

Summary

Operation of a cw thulium laser emitting at 816 nm has been demonstrated in bulk Tm:YLF with 46% slope efficiency. Prior cw demonstrations of this transition have been limited to ZBLAN fiber hosts and prior lasing in bulk crystalline host material has been limited to quasi-cw operation due to population trapping. Trapping at the 3F4 level was mitigated by co-lasing at 1876 nm. The co-lasing technique should be applicable to room-temperature operation and to power scaling of YLF and other crystal hosts.
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Summary

Operation of a cw thulium laser emitting at 816 nm has been demonstrated in bulk Tm:YLF with 46% slope efficiency. Prior cw demonstrations of this transition have been limited to ZBLAN fiber hosts and prior lasing in bulk crystalline host material has been limited to quasi-cw operation due to population...

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Fluidic microoptics with adjustable focusing and beam steering for single cell optogenetics

Published in:
Opt. Express, Vol. 25, No. 14, 10 July 2017, pp. 16825-16839.

Summary

Electrically controlled micron-scale liquid lenses have been designed, fabricated and demonstrated, that provide both adjustable focusing and beam steering, with the goal of applying them to optogenetic in vivo mapping of brain activity with single cell resolution. The liquid lens is formed by the interface between two immiscible liquids which are contained in a conically tapered lens cavity etched into a fused silica substrate. Interdigitated electrodes have been patterned along the sidewall of the taper to control the liquid lens curvature and tilt. Microlenses with apertures ranging in size from 30 to 80 μm were fabricated and tunable focusing ranging from 0.25 to 3 mm and beam steering of ± 1 degree have been demonstrated.
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Summary

Electrically controlled micron-scale liquid lenses have been designed, fabricated and demonstrated, that provide both adjustable focusing and beam steering, with the goal of applying them to optogenetic in vivo mapping of brain activity with single cell resolution. The liquid lens is formed by the interface between two immiscible liquids which...

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Use of mass spectrometric vapor analysis to improve canine explosive detection efficiency

Published in:
Anal. Chem., Vol. 89, 9 June 2017, 6482-90.

Summary

Canines remain the gold standard for explosives detection in many situations, and there is an ongoing desire for them to perform at the highest level. This goal requires canine training to be approached similarly to scientific sensor design. Developing a canine training regimen is made challenging by a lack of understanding of the canine's odor environment, which is dynamic and typically contains multiple odorants. Existing methodology assumes that the handler's intention is an adequate surrogate for actual knowledge of the odors cuing the canine, but canines are easily exposed to unintentional explosive odors through training material cross-contamination. A sensitive, real-time (~1 s) vapor analysis mass spectrometer was developed to provide tools, techniques, and knowledge to better understand, train, and utilize canines. The instrument has a detection library of nine explosives and explosive-related materials consisting of 2,4-dinitrotoluene (2,4-DNT), 2,6-dinitrotoluene (2,6-DNT), 2,4,6-trinitrotoluene (TNT), nitroglycerin (NG), 1,3,5-trinitroperhydro-1,3,5-triazine (RDX), pentaerythritol tetranitrate (PETN), triacetone triperoxide (TATP), hexamethylene triperoxide diamine (HMTD), and cyclohexanone, with detection limits in the parts-per-trillion to parts-per-quadrillion range by volume. The instrument can illustrate aspects of vapor plume dynamics, such as detecting plume filaments at a distance. The instrument was deployed to support canine training in the field, detecting cross-contamination among training materials, and developing an evaluation method based on the odor environment. Support for training material production and handling was provided by studying the dynamic headspace of a nonexplosive HMTD training aid that is in development. These results supported existing canine training and identified certain areas that may be improved.
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Summary

Canines remain the gold standard for explosives detection in many situations, and there is an ongoing desire for them to perform at the highest level. This goal requires canine training to be approached similarly to scientific sensor design. Developing a canine training regimen is made challenging by a lack of...

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Open-source, community-driven microfluidics with Metafluidics

Summary

Microfluidic devices have the potential to automate and miniaturize biological experiments, but open-source sharing of device designs has lagged behind sharing of other resources such as software. Synthetic biologists have used microfluidics for DNA assembly, cell-free expression, and cell culture, but a combination of expense, device complexity, and reliance on custom set-ups hampers their widespread adoption. We present Metafluidics, an open-source, community-driven repository that hosts digital design files, assembly specifications, and open-source software to enable users to build, configure, and operate a microfluidic device. We use Metafluidics to share designs and fabrication instructions for both a microfluidic ring-mixer device and a 32-channel tabletop microfluidic controller. This device and controller are applied to build genetic circuits using standard DNA assembly methods including ligation, Gateway, Gibson, and Golden Gate. Metafluidics is intended to enable a broad community of engineers, DIY enthusiasts, and other nontraditional participants with limited fabrication skills to contribute to microfluidic research.
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Summary

Microfluidic devices have the potential to automate and miniaturize biological experiments, but open-source sharing of device designs has lagged behind sharing of other resources such as software. Synthetic biologists have used microfluidics for DNA assembly, cell-free expression, and cell culture, but a combination of expense, device complexity, and reliance on...

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Re-engineering Artificial Muscle with Microhydraulics

Published in:
Nature Microsystems & Nanoengineering, vol. 3

Summary

We introduce a new type of actuator, the microhydraulic stepping actuator (MSA), which borrows design and operational concepts from biological muscle and stepper motors. MSAs offer a unique combination of power, efficiency, and scalability not easily achievable on the microscale. The actuator works by integrating surface tension forces produced by electrowetting acting on scaled droplets along the length of a thin ribbon. Like muscle, MSAs have liquid and solid functional components and can displace a large
fraction of their length. The 100 μm pitch MSA presented here already has an output power density of over 200 W kg− 1, rivaling the most powerful biological muscles, due to the scaling of surface tension forces, MSA’s power density grows quadratically as its dimensions are reduced.
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Summary

We introduce a new type of actuator, the microhydraulic stepping actuator (MSA), which borrows design and operational concepts from biological muscle and stepper motors. MSAs offer a unique combination of power, efficiency, and scalability not easily achievable on the microscale. The actuator works by integrating surface tension forces produced by...

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Aircraft laser strike geolocation system

Published in:
17th AIAA Aviation Technology, Integration, and Operations Conf., 5-9 June 2017.

Summary

Laser strikes against aircraft are increasing at an alarming rate, driven by the availability of cheap powerful lasers and a lack of deterrence due to the challenges of locating and apprehending perpetrators. Although window coatings and pilot goggles effectively block laser light, uptake has been low due to high cost and pilot reluctance. This paper describes the development and testing of a proof-of-concept ground based sensor system to rapidly geolocate the origin of a laser beam in a protected region of airspace and disseminate this information to law enforcement to allow a timely and targeted response. Geolocation estimates with accuracies of better than 20 m have been demonstrated within 30 seconds of an event at a range of 8.9 nmi with a 450 mW laser. Recommendations for an operational prototype at an airport are also described.
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Summary

Laser strikes against aircraft are increasing at an alarming rate, driven by the availability of cheap powerful lasers and a lack of deterrence due to the challenges of locating and apprehending perpetrators. Although window coatings and pilot goggles effectively block laser light, uptake has been low due to high cost...

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