Publications

Graphs are a general approach for representing information that spans the widest possible range of computing applications. They are particularly important to computational biology, web search, and knowledge discovery. As the sizes of graphs increase, the need to apply advanced mathematical and computational techniques to solve these problems is growing...

Kronecker graphs have been shown to be one of the most promising models for real-world networks. Visualization of Kronecker graphs is an important challenge. This chapter describes an interactive framework to assist scientists and engineers in generating, analyzing, and visualizing Kronecker graphs with as little effort as possible.

We present the Hogs and Slackers genetic algorithm (GA) which addresses the problem of improving the parallelization efficiency of sparse matrix computations by optimally distributing blocks of matrices data. The performance of a distribution is sensitive to the non-zero patterns in the data, the algorithm, and the hardware architecture. In...

This chapter presents notation, definitions, and conventions for graphs, matrices, arrays, and operations upon them.

Detecting subgraphs of interest in larger graphs is the goal of many graph analysis techniques. The basis of detection theory is computing the probability of a “foreground” with respect to a model of the “background” data. Hidden Markov Models represent one possible foreground model for patterns of interaction in a...

An analytical theory of power law graphs is presented based on the Kronecker graph generation technique. Explicit, stochastic, and instance Kronecker graphs are used to highlight different properties. The analysis uses Kronecker exponentials of complete bipartite graphs to formulate the substructure of such graphs. The Kronecker theory allows various high-level...

A linear algebraic approach to graph algorithms that exploits the sparse adjacency matrix representation of graphs can provide a variety of benefits. These benefits include syntactic simplicity, easier implementation, and higher performance. Selected examples are presented illustrating these benefits. These examples are drawn from the remainder of the book in...

We have developed a remote detection system consisting of commercially available retroreflective material coated with an analyte-specific colorimetric dye. Quantitative performance modeling predicts that, given the appropriate indicator dye, a system with a 10 cm optic and eye-safe illumination should be capable of detecting small droplets of contamination at kilometer...

This paper explores both supervised and unsupervised topic modeling for spoken audio documents using only phonetic information. In cases where word-based recognition is unavailable or infeasible, phonetic information can be used to indirectly learn and capture information provided by topically relevant lexical items. In some situations, a lack of transcribed...

Radiation effects are presented for the first time for vertically integrated 3 x 64 -kb SOI SRAM circuits fabricated using the 3D process developed at MIT Lincoln Laboratory. Three fully-fabricated 2D circuit wafers are stacked using standard CMOS fabrication techniques including thin-film planarization, layer alignment and oxide bonding. Micron-scale dense...